The microbiota has become a subject of major interest for many specialties. In this context, a new technical platform has been set up by the “Intestinal inflammation” team at the center, to support you in your microbiota projects (NGS analyzes of targeted metagenomics).


  1. DNA extraction (from stool, cecal juice, etc.)
  2. PCR amplification (V3-V4 rDNA 16S, but possibility of developing other amplicons)
  3. Illumina sequencing (MiSeq)
  4. Bioinformatics analyzes carried out on FROGS (INRAE), and analysis on QIIME in development.


If you have any questions, please do not hesitate to contact us.

Scientific officer :

Technical Manager :